my bad i meant shell
yes it will give you access to all files regardless, all so some programs/virus's use an ACL (Access Control Lists) hence anti-virus's cant access the locked folder, which in turn don't let the anti-virus scan the file/folder,in shell use the command
cacls
oh and...
well i dont see why you are fussing only with linux, you can get rid of it with plain old DOS/cmd prompt, yes indeed it is difficult to clean form with in an infected system, but it is not possible,...
if your system is clean,
attrib -s -h -r autorun.ini
del autorun.ini
the virus...
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